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Search Publications by: Marc L. Salit (Assoc)

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Displaying 76 - 100 of 124

Morphological Changes Driven by Nanofibrous Scaffolds Induce Marrow Stromal Cell Osteogenesis

October 11, 2011
Author(s)
Carl G. Simon Jr., Kaushik Chatterjee, Christopher K. Tison, Girish Kumar, Patrick S. Pine, Marc L. Salit, Jennifer H. McDaniel, Marian F. Young
Cells are sensitive to tissue scaffold architecture and these cell-material interactions drive cell functions critical in tissue regeneration. Results presented here demonstrate that nanofiber scaffolds force primary human bone marrow stromal cells (hBMSCs

Synthetic spike-in standards for RNA-seq experiments

September 1, 2011
Author(s)
Marc L. Salit, Lichun Jiang, Felix Schlesinger, Brian Oliver, Carrie Davis, Yu Zhang, Renhua Li, Thomas R. Gingeras
High-throughput sequencing of cDNA (RNA-seq) is a widely deployed transcriptome profiling and annotation technique, but questions about the performance of different protocols and platforms remain. We used a newly developed pool of 96 synthetic RNAs with

Contributions of the EMERALD project to assessing and improving microarray data quality

January 1, 2011
Author(s)
Vidar Beisvag, Audrey Kauffmann, James Malone, Carole Foy, Marc L. Salit, Schimmel Heinz, Erik Bongcam-Rudloff, Ulf Landegren, Helen Parkinson, Wolfgang Huber, Alvis Brazma, Arne K. Sandvik, Martin Kuiper
While MIAME standards have helped to increase the value of microarray data deposited in public databases like ArrayExpress and GEO, limited means have been available to assess the quality of the data or to identify the procedures that were used to

Image-Based Feedback Control for Real-Time Sorting of Microspheres in a Microfluidic Device

January 1, 2010
Author(s)
Matt S. Munson, James Spotts, Antti Niemisto, Jyrki Selinummi, Jason G. Kralj, Marc L. Salit, Adrian Ozinsky
We have developed a fully automated control system to distribute user-defined numbers of antibody-functionalized fluorescent beads (scalable from tens to hundreds) to addressable assay chambers within a microfluidic PDMS device. We report an automated bead

Standards in Gene Expression Microarray Experiments

August 1, 2006
Author(s)
Marc L. Salit
The use of standards in gene expression measurements with DNA microarrays is ubiquitous—they just are not yet the kind of standards that have yielded microarray gene expression profiles that can be readily compared across different studies and different

High-accuracy determination of epitaxial AlGaAs composition with inductively coupled plasma optical emission spectroscopy

March 1, 2006
Author(s)
Kristine A. Bertness, C. M. Wang, Marc L. Salit, Gregory C. Turk, Therese A. Butler, Albert J. Paul, Larry Robins
Inductively coupled plasma optical emission spectroscopy is shown to confirm a recent correlation between photoluminescence (PL) peak energy for AlGaAs epitaxial films and the Al mole fraction x of those films. These two methods also agree within their