Reference Data

The Biosystems and Biomaterials Division (BBD) develops measurement technologies to bolster the bioeconomy and foster innovation. To support these efforts, BBD staff acquire, generate, and verify numerous types of data products, ranging from "working data" to Standard Reference Data (SRD). Below you will find a variety of publicly available datasets, ranging from genomic benchmarks to SEM imagery. Unless otherwise noted, products listed below are not considered Standard Reference products and provided as is.

Standard Reference Data

• Thermodynamics of Enzyme Catalyzed Reactions SRD 74

Data Products

Image	Name	Description	Contact
	GIAB	Genome in a Bottle benchmarks and datasets to assess human genome sequencing and bioinformatics	Zook
	DiameterJ	Reference images for validating image analysis measurements of fiber diameter in scanning electron micrographs: this article provides several sets of test images that can be used to develop or validate new fiber analysis algorithms	Simon
	3D Cell-Scaffold Interactions	The chemical, structural and mechanical properties of the scaffold influence cell function, and these effects are dependent on the morphologies that cells take on during scaffold culture.”	Simon
	3D Stem Cell Morphologies	Online interface for browsing and viewing a library of 3D stem cell morphologies	Simon
	3D Image Data	Raw and processed data of 1000 z-stacks of human bone marrow stromal cells cultured in 10 different microenvironments.  Includes both raw and processed data for 2 channels: cytoskeleton and nucleus.	Simon
	Absorbance Imaging	Reference images for training artificial intelligence algorithms to analyze absorbance images of cells to predict their function	Simon

Curated Data Collections

• Chem-Blast Gateway for PDB Ligands (formerly SRD 155) combined with HIV Protease Database SRD 102